That's the hardest part. I came though the roof rack and went down through the support foot. I used a silicone sealant to keep it water tight (even though its contained in the roof rack housing).
I ran them down the front windshield post, through the fire wall, and to the battery. You can see I still have to add a little more tape to the cover.

4 Roof Rack Lights, 100 watts each
IMG_0321.jpg (388.66 KB. 1600x1200 - viewed 196 times.)

4 Roof Rack Lights, 100 watts each
IMG_0320.jpg (287.54 KB. 1600x1200 - viewed 191 times.)

4 Roof Rack Lights, 100 watts each
IMG_0323.jpg (401.56 KB. 1600x1200 - viewed 190 times.)